getAllenTemplate Loads the anatomical data from AIBS in CCF space

Syntax

V = getAllenStructure()
V = getAllenStructure(type)
V = getAllenStructure(type, res)
V = getAllenStructure(type, res, hemi)

Description

V = getAllenStructure(type) retrieves the structure data for the given type at the default resolution and for both hemispheres.

V = getAllenStructure(type, res) retrieves the structure data at the specified resolution.

V = getAllenStructure(type, res, hemi) retrieves the structure data for the specified hemisphere.

Examples

V = getAllenStructure();
V = getAllenStructure('ara_nissl');
V = getAllenStructure('annotation', 50);
V = getAllenStructure('annotation', 50, 1);

Input Arguments

type - Allen Brain Atlas structure ID ('annotation' (default) | 'ara_nissl' | 'average_template')

res - resolution in microns (100 (default) | numeric)

hemi - hemisphere selection (3 (default) | 1 | 2) 1 for left, 2 for right, 3 for both hemispheres.

Authors

Mehul Gajwani, Monash University, 2025

See also

findAllenStructure, getAllenHMask