getAllenStructure Get structure volume/mask in CCF space

Syntax

V = getAllenStructure(structureId)
V = getAllenStructure(structureId, res)
V = getAllenStructure(structureId, res, hemi)

Description

V = getAllenStructure(structureId) retrieves the structure data for the given structureId at the default resolution and for both hemispheres.

V = getAllenStructure(structureId, res) retrieves the structure data at the specified resolution.

V = getAllenStructure(structureId, res, hemi) retrieves the structure data for the specified hemisphere.

Examples

V = getAllenStructure(997);
V = getAllenStructure(997, 50);
V = getAllenStructure(997, 50, 1);

Input Arguments

structureId - Allen Brain Atlas structure ID (997 (default) | positive integer scalar)

res - resolution in microns (100 (default) | numeric)

hemi - hemisphere selection (3 (default) | 1 | 2) 1 for left, 2 for right, 3 for both hemispheres.

Authors

Mehul Gajwani, Monash University, 2025

See also

findAllenStructure, getAllenHMask